!IV.4. Constant pressure ensemble run
!This input runs MC simulation in the isothermal-isobaric ensemble. The
!solute is the protein a Na+ - DMP- ion pair.
FILE nadmp
TITL run 2 slt molecs in water, only moves
TITL NA+DMP-: KOLLMAN-STRAATSMA(NA+)
HRDW VC32 ! 32-bit vector
SVVC SPCC 7.75 ! Solvent cutoff
SUVC MIGC 0.0 ! MI on the solute
PBCN RECT 32.031 21.354 21.354
TEMP 298
NSLV 484
STEP 0.10 00.0 0.55 40.0 05
SVPT TIP3 TIP3
SUPT AM94
SAMP FBSC 0.5 ! Scaled force-biased sampling
2
4.00 0.2 7.0 1.0
PMOD AM94 1 ! Potential library modification
49 46
11 1.59955E+00 0.478833E-01
SLTA SMPL MMC READ 8
49 2.70000 0.0 0.00000 1.00000 1
38 0.0 0.0 0.0 0.91200 4
35 0.74000 0.0 1.28171 -0.65500 4
35 0.74000 0.0 -1.28171 -0.65500 4
37 -0.99164 -1.25560 0.00000 -0.41000 4
37 -0.99164 1.25560 0.00000 -0.41000 4
4 -1.92075 1.43300 1.07251 0.10900 4
4 -1.92075 -1.43300 -1.07251 0.10900 4
IBEN UNIF ISOT 1.0 250.0 500 100 !(TPN) ensemble
CNFG READ ASCI
RUNS 2000000 50000 1000000 0100000 100000
STOP SLFT
!Files needed for run:
! * nadmp.crd: initial configuration.
!Files created by the run:
! * nadmp.ckp: checkpoint file after the run;
! * nadmp.crd: initial configuration.
! * nadmp.2.crd: final configuration after the run.