The finite difference thermodynamic integration,
tested on calculating the hydration free energy difference
between acetone and dimethyl amine in water
Abstract:
A new technique is proposed to compute by Monte Carlo (or
molecular dynamics) computer simulation the hydration free energy
differences. The method, called finite difference thermodynamic
integration, is a combination of the thermodynamic integration
and the perturbation method. It was compared with thermodynamic
integration over two different paths and the perturbation method
on computing the solvation free-energy difference between the
dilute aqueous solution of acetone and dimethyl amine. Finite
difference thermodynamic integration was found to have the best
convergence characteristics among the methods tested.