Statistical properties of protein-protein interfaces
Abstract:
The properties of 1172 protein complexes (downloaded from the PDB)
have been studied based on the concept of circular variance
as a buriedness indicator and the concept of mutual proximity
as a parameter-free definition of contact.
The propensities of residues to be in the protein,
on the surface or form contact, as well as residue pairs to form contact
were calculated.
In addition, the concept of circular variance has been used
to compare the ruggedness and shape of the contact surface
with the overall surface.