Human Uroporphyrinogen III Synthase:
High Affinity Purification, NMR Resonance Assignments and
Mapping of the Active Site NMR Studies Did Not Support
a Heme Enzyme Complex.
Uroporphyrinogen-III-synthase (URO-synthase) catalyzes the cyclization
and D-ring isomerization of hydroxymethylbilane (HMB)
to uroporphyrinogen (URO'gen) III,
the cyclic tetrapyrrole and physiologic percursor of heme.
The deficient activity of human URO-synthase results in the
autosomal recessive cutaneous disorder, congenital erythropoietic porphyria.
Previously, the crystal structure of human URO-synthase was determined.
To characterize the active site of human URO-synthase
and its possible interaction in a cytosolic complex with
hydroxymethylbilane-synthase (HMB-synthase) or
uroporphyrinogen-decarboxylase (URO-decarboxylase) by NMR,
the three recombinant human enzymes were expressed and purified
to homogeneity in high yield.
Using an 800 MHz instrument with a cryoprobe,
assignment of the URO-synthase backbone 13C resonances (100%),
backbone
1HN
resonances (99.6%), non-proline backbone
1HN
and
15N
resonances (94%),
and side-chain
13C
and
1HN
resonances (85%) was achieved.
The absence of chemical shift changes in the
15N
spectrum
of URO-synthase mixed with the homogeneous HMB-synthase
apoenzyme or URO-decarboxylase precluded a
stable cytosolic enzyme complex.
In silico docking of the URO-synthase crystal structure
with an inhibitor,
ND-methyl-1-formylbilane,
and the product,
URO'gen III, localized the enzyme's putative active site
to the cleft between the enzyme's two major domains.
NMR analyses of URO-synthase titrated with
ND-methyl-1-formylbilane,
or URO'gen III revealed
resonance perturbations of specific residues lining the cleft,
confirming the in silico docking localization of the active site.
These NMR studies provide the resonance assignments
for human URO-synthase, exclude the interaction of the enzyme
with HMB-synthase or URO-decarboxylase in a cytosolic complex,
and identify the location of the enzyme's active site.